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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_44546855_44548328_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

44546855 - 44548328

Intron Length:

1474

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTAGA

5'SS Class:

strong_major

3'SS Sequence:

TTCTGAATTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTCAT

U12 Branch Point Sequence:

ACATTCTGAATT

Flanking Amino Acid:

LLDCFHAISKALQCDFLNFD

Intron Amino Acid Position:

200

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

96.3

1.09

0.7

87.1

Major BPS

84.8

0.86

1.1

85.7

34.9

Major PPT

74.1

0.54

0.9

71.2

38.6

Minor 5ss

35.1

-1.7

2.7

42.8

Minor BPS

61.8

0.45

1.4

71.66

39.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007708

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030506

44529414 - 44572333

42920

ENSAPLT00000022218

44542844 - 44572333

29490

ENSAPLT00000020479

44529414 - 44572333

42920

ENSAPLT00000008035

44530726 - 44572333

41608

ENSAPLT00000038324

44533217 - 44572333

39117