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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_44548396_44550581_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

44548396 - 44550581

Intron Length:

2186

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATAAT

5'SS Class:

strong_major

3'SS Sequence:

TCCTACGTTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTAAC

U12 Branch Point Sequence:

GAAAATTTAACA

Flanking Amino Acid:

LAGSVSYLPFRDASFGTCSF

Intron Amino Acid Position:

177

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.4

0.93

0.8

89.4

23.3

Major BPS

80.9

0.77

0.8

81.7

25.4

Major PPT

75.2

0.57

0.9

67.9

37.4

Minor 5ss

36.8

-1.5

2.9

50.6

45.9

Minor BPS

54.7

0.14

1.5

60.53

38.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007708

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020479

44529414 - 44572333

42920

ENSAPLT00000008035

44530726 - 44572333

41608

ENSAPLT00000038324

44533217 - 44572333

39117

ENSAPLT00000030506

44529414 - 44572333

42920

ENSAPLT00000022218

44542844 - 44572333

29490