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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_44563199_44565202_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

44563199 - 44565202

Intron Length:

2004

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGTACA

5'SS Class:

strong_major

3'SS Sequence:

TTTCTCCAAATAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

GTTTTTTTAATG

Flanking Amino Acid:

FCIDDELVYENFHADFGPLN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

83.5

27.8

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

70.4

0.46

0.9

67.5

32.8

Minor 5ss

37.7

-1.4

2.7

44.2

Minor BPS

72.1

0.56

1.2

71.21

36.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007708

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008035

44530726 - 44572333

41608

ENSAPLT00000038324

44533217 - 44572333

39117

ENSAPLT00000030506

44529414 - 44572333

42920

ENSAPLT00000022218

44542844 - 44572333

29490

ENSAPLT00000020479

44529414 - 44572333

42920