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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_44565297_44571975_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

44565297 - 44571975

Intron Length:

6679

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGAGGGGC

5'SS Class:

major

3'SS Sequence:

TCTTGCATTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATAAA

U12 Branch Point Sequence:

TTTTCTTGCATT

Flanking Amino Acid:

AGTETCVRIADRLYFAILCQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.4

0.58

58.8

40.6

Major BPS

78.6

0.71

78.6

Major PPT

81.3

0.7

0.9

77.9

35.2

Minor 5ss

24.6

-2.9

3.4

32.5

42.6

Minor BPS

0.43

1.9

84.4

36.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007708

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022218

44542844 - 44572333

29490

ENSAPLT00000020479

44529414 - 44572333

42920

ENSAPLT00000008035

44530726 - 44572333

41608

ENSAPLT00000038324

44533217 - 44572333

39117

ENSAPLT00000030506

44529414 - 44572333

42920