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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_44576233_44576476_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

44576233 - 44576476

Intron Length:

244

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAAAA

5'SS Class:

strong_major

3'SS Sequence:

CTGTTTTGTTTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGTAT

U12 Branch Point Sequence:

TTCTAGGTAACA

Flanking Amino Acid:

MKRGEGNNASVQSPHVKSSV

Intron Amino Acid Position:

137

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.9

1.01

0.7

23.7

Major BPS

71.5

0.53

1.4

71.7

44.6

Major PPT

0.61

0.9

76.9

37.3

Minor 5ss

32.8

-2

2.9

39.7

45.8

Minor BPS

45.7

-0.3

2.7

67.79

44.7

Associated Gene:

Gene:

PRXL2C

Ensembl Gene ID:

ENSAPLG00000007699

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027839

44572802 - 44579314

6513

ENSAPLT00000007983

44575192 - 44579314

4123