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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_44576583_44576989_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

44576583 - 44576989

Intron Length:

407

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATAAA

5'SS Class:

strong_major

3'SS Sequence:

ACATATTTTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATACAT

U12 Branch Point Sequence:

TTTTTTGTATAT

Flanking Amino Acid:

IGQSSYHHIKPFCSLTGYTH

Intron Amino Acid Position:

102

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.4

0.91

0.8

85.6

24.6

Major BPS

74.9

0.62

81.3

29.9

Major PPT

76.2

0.59

0.9

69.5

40.5

Minor 5ss

34.4

-1.8

2.8

41.8

44.8

Minor BPS

-0

2.3

76.11

Associated Gene:

Gene:

PRXL2C

Ensembl Gene ID:

ENSAPLG00000007699

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027839

44572802 - 44579314

6513

ENSAPLT00000007983

44575192 - 44579314

4123