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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_44577044_44578614_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

44577044 - 44578614

Intron Length:

1571

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTATA

5'SS Class:

strong_major

3'SS Sequence:

TGTTCTGTTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCAAT

U12 Branch Point Sequence:

TCAGTTTCAATC

Flanking Amino Acid:

LAKVPRSYLQEANVRLIVIG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.8

0.91

0.8

89.9

22.1

Major BPS

76.9

0.67

1.2

31.9

Major PPT

77.4

0.62

0.9

69.7

41.5

Minor 5ss

-1

2.8

51.7

39.1

Minor BPS

48.2

-0.1

1.6

54.09

38.8

Associated Gene:

Gene:

PRXL2C

Ensembl Gene ID:

ENSAPLG00000007699

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007983

44575192 - 44579314

4123

ENSAPLT00000027839

44572802 - 44579314

6513