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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_44674117_44675414_R

Intron Information:

Intron Rank:

144817

Intron Class:

major

Intron Phase:

Intron Coordinates:

44674117 - 44675414

Intron Length:

1298

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTAGT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTGTCTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTAAA

U12 Branch Point Sequence:

ACAATCTGACCG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.1

0.87

0.9

84.6

33.2

Major BPS

73.8

0.59

0.9

26.8

Major PPT

86.4

0.82

0.7

85.6

29.2

Minor 5ss

39.2

-1.2

2.8

51.8

Minor BPS

-0.5

1.7

43.81

41.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025293

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047472

44673077 - 44682598

9522

ENSAPLT00000036843

44673077 - 44682598

9522

ENSAPLT00000026041

44673077 - 44676272

3196