Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_4499682_4499776_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4499682 - 4499776

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTAAGTGCT

5'SS Class:

major

3'SS Sequence:

TTTGTTTCACTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTTAT

U12 Branch Point Sequence:

ATTTGTTTCACT

Flanking Amino Acid:

IRLKKNTFVPADILLLSSSE

Intron Amino Acid Position:

210

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.3

0.6

1.1

72.2

37.5

Major BPS

88.7

0.96

0.8

36.5

Major PPT

76.4

0.59

0.9

71.3

39.5

Minor 5ss

38.2

-1.3

3.4

60.6

43.7

Minor BPS

57.5

0.32

2.2

81.74

40.3

Associated Gene:

Gene:

ATP8B1

Ensembl Gene ID:

ENSAPLG00000002575

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008804

4495851 - 4517583

21733