Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_4508659_4509153_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

4508659 - 4509153

Intron Length:

495

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTATGTTTG

5'SS Class:

weak_major

3'SS Sequence:

CTTCATTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTCAT

U12 Branch Point Sequence:

TTTTTCTTCATT

Flanking Amino Acid:

KREATEEALDVFANETLRTL

Intron Amino Acid Position:

597

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.7

0.63

1.1

73.5

Major BPS

87.4

0.93

0.9

87.9

29.5

Major PPT

86.5

0.82

0.7

84.1

30.4

Minor 5ss

58.2

0.28

2.3

70.9

39.7

Minor BPS

73.4

0.82

1.7

91.07

32.9

Associated Gene:

Gene:

ATP8B1

Ensembl Gene ID:

ENSAPLG00000002575

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008804

4495851 - 4517583

21733

ENSAPLT00000002598

4495863 - 4517583

21721