Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_4510910_4511568_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4510910 - 4511568

Intron Length:

659

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAG|GCAAGTGAA

5'SS Class:

strong_major

3'SS Sequence:

AATTTCTTTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATGAA

U12 Branch Point Sequence:

TTATCCTTGATT

Flanking Amino Acid:

ETTICYGEDISALLQTRLEN

Intron Amino Acid Position:

714

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

98.4

1.14

0.7

82.6

33.6

Major BPS

67.7

0.44

38.9

Major PPT

0.74

0.9

74.1

40.6

Minor 5ss

21.7

-3.3

3.8

30.8

43.1

Minor BPS

83.5

1.14

0.9

91.98

30.5

Associated Gene:

Gene:

ATP8B1

Ensembl Gene ID:

ENSAPLG00000002575

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002598

4495863 - 4517583

21721

ENSAPLT00000008804

4495851 - 4517583

21733