Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_4515166_4516112_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4515166 - 4516112

Intron Length:

947

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACTCTCC

5'SS Class:

major

3'SS Sequence:

TTCCTTTATTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTCCTTTATT

Flanking Amino Acid:

PVLLVGLFDQDVSDKLSLRF

Intron Amino Acid Position:

957

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.1

0.45

1.1

59.8

40.3

Major BPS

96.5

1.15

0.6

34.2

Major PPT

73.6

0.53

79.2

Minor 5ss

44.1

-0.6

60.6

43.9

Minor BPS

81.6

1.08

1.4

96.2

29.4

Associated Gene:

Gene:

ATP8B1

Ensembl Gene ID:

ENSAPLG00000002575

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008804

4495851 - 4517583

21733

ENSAPLT00000002598

4495863 - 4517583

21721