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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_4516743_4517281_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4516743 - 4517281

Intron Length:

539

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGTCCT

5'SS Class:

strong_major

3'SS Sequence:

TTGATGTCCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTAAA

U12 Branch Point Sequence:

GTTGCCTTACAT

Flanking Amino Acid:

VLFPSAFQFTGTAPNALRQP

Intron Amino Acid Position:

1085

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

1.3

75.3

40.8

Major BPS

76.5

0.66

0.8

75.9

24.9

Major PPT

66.7

0.38

0.9

58.5

42.9

Minor 5ss

32.3

-2

2.8

43.1

43.7

Minor BPS

59.4

0.37

1.9

77.97

Associated Gene:

Gene:

ATP8B1

Ensembl Gene ID:

ENSAPLG00000002575

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008804

4495851 - 4517583

21733

ENSAPLT00000002598

4495863 - 4517583

21721