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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_4537618_4537807_F


Intron Information:

Intron Rank:
1

Intron Class:
major-like

Intron Phase:
0

Intron Coordinates:
4537618 - 4537807

Intron Length:
190

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
ATT|GTAATTTTC

5'SS Class:
major

3'SS Sequence:
TTTTCTGGGGAAG|G

3'SS Class:
degenerate_major

U2 Branch Point Sequence:
AAAAAAA

U12 Branch Point Sequence:
CTCCAGTTGAGT

Flanking Amino Acid:
GIGVGVIGVTVL

Intron Amino Acid Position:
3

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
67.6
0.42
1.1
69.8
35.1

Major BPS
47.9
-0.1
0.9
51.7
28.4

Major PPT
59.5
0.21
1.3
63.7
41.9

Minor 5ss
47.4
-0.3
2.8
67.7
37.3

Minor BPS
40.6
-0.6
2.4
57.1
45.7

Associated Gene:

Gene:
FECH

Ensembl Gene ID:

Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

4537612 - 4547995
10384