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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_4538013_4543286_F


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
4538013 - 4543286

Intron Length:
5274

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTACTTCTT

5'SS Class:
major

3'SS Sequence:
CTTTGTCTGGCAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TCTGCAA

U12 Branch Point Sequence:
TTTTCTGCAACT

Flanking Amino Acid:
KLLDSMSPHTAPHKYYIGFR

Intron Amino Acid Position:
71

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
77.2
0.64
1.1
74.8
41.3

Major BPS
53.2
0.08
1.4
65.6
41.4

Major PPT
76.5
0.6
1
73
37.4

Minor 5ss
39.2
-1.2
3.3
59.3
45.1

Minor BPS
61.4
0.44
2.2
87.98
37.6

Associated Gene:

Gene:
FECH

Ensembl Gene ID:

Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

4537612 - 4547995
10384