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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_4545190_4545956_F


Intron Information:

Intron Rank:
5

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
4545190 - 4545956

Intron Length:
767

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TCT|GTGAGTTAC

5'SS Class:
major

3'SS Sequence:
TTGTGTCTTGAAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
AAGAAAA

U12 Branch Point Sequence:
TGTGTCTTGAAG

Flanking Amino Acid:
LFSAHSLPMSVVNRGDPYPQ

Intron Amino Acid Position:
185

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
71.1
0.5
1.1
67.8
33.5

Major BPS
46.6
-0.2
1
49
32

Major PPT
71.4
0.48
1.1
71.9
38.4

Minor 5ss
38
-1.4
3
53.4
43.8

Minor BPS
53.5
-0
1.7
59.79
42.1

Associated Gene:

Gene:
FECH

Ensembl Gene ID:

Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

4537612 - 4547995
10384