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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_4547097_4547313_F


Intron Information:

Intron Rank:
7

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
4547097 - 4547313

Intron Length:
217

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAA|GTAAGTAGT

5'SS Class:
strong_major

3'SS Sequence:
GTTTTTGGTCTAG|T

3'SS Class:
major_PPT

U2 Branch Point Sequence:
ACTTAAC

U12 Branch Point Sequence:
GTAGACTTAACT

Flanking Amino Acid:
IEYAQVLANECGVENIRRAE

Intron Amino Acid Position:
276

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
87.1
0.87
0.9
84.6
33.2

Major BPS
68.3
0.45
1
69.6
32.8

Major PPT
72.6
0.51
1
65.8
45.3

Minor 5ss
39.2
-1.2
2.8
51.8
39

Minor BPS
65.8
0.57
1.6
79.01
42.5

Associated Gene:

Gene:
FECH

Ensembl Gene ID:

Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

4537612 - 4547995
10384