Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_45511096_45511290_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

45511096 - 45511290

Intron Length:

195

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAACAGCT

5'SS Class:

major

3'SS Sequence:

TTCTTCTCTCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

AGTTTCTTATTT

Flanking Amino Acid:

KGKLSLLINLGDDKTHSSNT

Intron Amino Acid Position:

375

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.66

1.1

72.5

37.3

Major BPS

96.5

1.15

0.6

34.2

Major PPT

76.8

0.6

75.7

33.2

Minor 5ss

38.6

-1.3

3.4

57.4

46.8

Minor BPS

65.4

0.56

1.5

78.63

37.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029241

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037556

45439109 - 45655437

216329

ENSAPLT00000036733

45439109 - 45655437

216329