Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_45526194_45574758_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

45526194 - 45574758

Intron Length:

48565

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTATGTTCC

5'SS Class:

major

3'SS Sequence:

AATTTTCTTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

CTGTTTTTAATT

Flanking Amino Acid:

KQYRQEESTWAFSGNTNADS

Intron Amino Acid Position:

258

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.1

0.66

68.5

37.5

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

0.65

0.8

70.9

Minor 5ss

47.1

-0.3

2.4

53.9

43.4

Minor BPS

71.1

0.74

1.2

78.42

39.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029241

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037556

45439109 - 45655437

216329

ENSAPLT00000036733

45439109 - 45655437

216329