Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_45654246_45654683_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

45654246 - 45654683

Intron Length:

438

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTTTGTCTT

5'SS Class:

major

3'SS Sequence:

TTGGATGCCTTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTAAT

U12 Branch Point Sequence:

TGTTTCCTAATA

Flanking Amino Acid:

RQARSKHGARVNVNMDSVTE

Intron Amino Acid Position:

124

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.8

0.63

1.1

75.6

Major BPS

81.9

0.79

0.9

80.1

Major PPT

61.8

0.27

58.7

42.7

Minor 5ss

42.6

-0.8

2.8

59.4

45.1

Minor BPS

0.5

1.6

76.52

34.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029241

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037556

45439109 - 45655437

216329

ENSAPLT00000036733

45439109 - 45655437

216329