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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_461177_463372_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

461177 - 463372

Intron Length:

2196

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGGACT

5'SS Class:

major

3'SS Sequence:

TCTTCTGTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTGAC

U12 Branch Point Sequence:

ATTTGACTAACT

Flanking Amino Acid:

NLRVRLGDVISIQPCPDVKY

Intron Amino Acid Position:

150

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.6

0.65

72.1

39.1

Major BPS

77.7

0.69

0.9

69.1

37.9

Major PPT

85.1

0.79

0.8

80.1

31.8

Minor 5ss

28.1

-2.5

3.3

39.9

45.9

Minor BPS

50.8

0.1

2.3

80.68

40.6

Associated Gene:

Gene:

VCP

Ensembl Gene ID:

ENSAPLG00000004533

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004747

455960 - 477162

21203