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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_463516_465137_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

463516 - 465137

Intron Length:

1622

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATAGCA

5'SS Class:

strong_major

3'SS Sequence:

TGTGATTTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACTGAA

U12 Branch Point Sequence:

GGACACTGAAAT

Flanking Amino Acid:

FLEAYRPIRKGDIFLVRGGM

Intron Amino Acid Position:

198

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.72

70.7

33.2

Major BPS

0.3

34.1

Major PPT

78.9

0.65

69.4

45.7

Minor 5ss

30.8

-2.2

3.3

45.5

Minor BPS

46.6

-0.1

1.7

60.39

41.4

Associated Gene:

Gene:

VCP

Ensembl Gene ID:

ENSAPLG00000004533

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004747

455960 - 477162

21203