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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_4637331_4639543_R


Intron Information:

Intron Rank:
23

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
4637331 - 4639543

Intron Length:
2213

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAAGGACT

5'SS Class:
strong_major

3'SS Sequence:
GCTGTCTCTGCAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
GTGCCAC

U12 Branch Point Sequence:
TGGGGTGCCACG

Flanking Amino Acid:
NSDSHLSFWQMNTSLLGSIG

Intron Amino Acid Position:
1311

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
91.8
0.98
0.8
85.2
31.7

Major BPS
43.9
-0.3
1.4
49.9
45.3

Major PPT
76.4
0.59
0.9
69.4
36.8

Minor 5ss
34.9
-1.7
3.2
49.5
46.5

Minor BPS
28.7
-1.8
2.4
31
41.8

Associated Gene:

Gene:
WDR7

Ensembl Gene ID:

Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

4637127 - 4726132
89006

4636520 - 4726132
89613

4636520 - 4726132
89613

4636520 - 4726132
89613