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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_46393962_46405884_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

46393962 - 46405884

Intron Length:

11923

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTGAGTGCG

5'SS Class:

strong_major

3'SS Sequence:

TTTATTTTTCTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

ATTTTTTTATTT

Flanking Amino Acid:

AGLKAGGCGAQQGIGRPSVY

Intron Amino Acid Position:

144

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

66.2

39.6

Major BPS

96.5

1.15

0.6

34.2

Major PPT

87.6

0.84

0.7

81.3

36.3

Minor 5ss

-2.5

33.4

41.6

Minor BPS

0.58

1.5

81.3

34.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013999

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014592

46375363 - 46406313

30951