Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_4658116_4662642_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4658116 - 4662642

Intron Length:

4527

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCTCT

5'SS Class:

strong_major

3'SS Sequence:

ATGTTCAATTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATAAT

U12 Branch Point Sequence:

TAATGTTCAATT

Flanking Amino Acid:

GLQECFPAICRFYMVSYYER

Intron Amino Acid Position:

1353

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.5

0.95

0.8

81.4

33.4

Major BPS

87.8

0.94

0.9

86.6

28.1

Major PPT

71.2

0.48

68.1

41.9

Minor 5ss

46.5

-0.4

2.8

65.7

45.4

Minor BPS

50.5

0.09

1.9

70.1

41.2

Associated Gene:

Gene:

WDR7

Ensembl Gene ID:

ENSAPLG00000014993

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041973

4599925 - 4726132

126208

ENSAPLT00000043883

4636520 - 4726132

89613

ENSAPLT00000015663

4637127 - 4726132

89006

ENSAPLT00000043521

4617370 - 4726132

108763

ENSAPLT00000015656

4656683 - 4726132

69450

ENSAPLT00000043034

4636520 - 4726132

89613

ENSAPLT00000042060

4636520 - 4726132

89613