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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_46581297_46593528_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

46581297 - 46593528

Intron Length:

12232

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCCTG

5'SS Class:

strong_major

3'SS Sequence:

ATTTATATTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

TTTTCAATAATT

Flanking Amino Acid:

SPGQRSRADAGHAGVSASMM

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.9

72.7

44.5

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

0.61

0.9

71.4

38.5

Minor 5ss

41.5

-0.9

3.1

55.8

48.4

Minor BPS

67.9

0.64

1.8

90.51

32.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002923

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014507

46581075 - 46755987

174913

ENSAPLT00000002950

46581075 - 46602801

21727