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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_466933_467311_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

466933 - 467311

Intron Length:

379

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCACC

5'SS Class:

strong_major

3'SS Sequence:

CCTCTGTCCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACCTAAA

U12 Branch Point Sequence:

ACCACCTAAATC

Flanking Amino Acid:

PALFKAIGVKPPRGILLYGP

Intron Amino Acid Position:

286

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.8

0.94

0.9

78.8

35.5

Major BPS

63.9

0.35

63.9

30.3

Major PPT

73.3

0.52

0.8

64.5

36.5

Minor 5ss

40.6

-1

2.8

52.8

44.1

Minor BPS

51.1

0.02

1.7

56.84

42.4

Associated Gene:

Gene:

VCP

Ensembl Gene ID:

ENSAPLG00000004533

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004747

455960 - 477162

21203