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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_46803529_46804640_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

46803529 - 46804640

Intron Length:

1112

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTGAGTACG

5'SS Class:

strong_major

3'SS Sequence:

CACTTTCTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACTCAA

U12 Branch Point Sequence:

ACTTTCTTACAG

Flanking Amino Acid:

CPSKIPTFHDRVQSFDESWM

Intron Amino Acid Position:

343

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.3

0.97

0.8

80.5

33.9

Major BPS

69.1

0.48

0.9

69.6

26.6

Major PPT

0.72

0.8

75.8

32.4

Minor 5ss

30.6

-2.2

2.5

34.1

41.4

Minor BPS

52.4

-0

1.8

58.22

43.6

Associated Gene:

Gene:

SHC3

Ensembl Gene ID:

ENSAPLG00000013246

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013803

46795002 - 46853850

58849