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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_46819520_46829907_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

46819520 - 46829907

Intron Length:

10388

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGACTT

5'SS Class:

strong_major

3'SS Sequence:

TCTGTCTCTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTCAC

U12 Branch Point Sequence:

TTGCCATAAACC

Flanking Amino Acid:

LDFNTRTQITREAISRVCEA

Intron Amino Acid Position:

204

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.3

0.8

84.6

33.3

Major BPS

81.3

0.78

0.8

83.4

26.1

Major PPT

83.8

0.76

0.8

81.1

30.9

Minor 5ss

37.9

-1.4

3.3

56.5

47.6

Minor BPS

53.9

0.1

69.13

Associated Gene:

Gene:

SHC3

Ensembl Gene ID:

ENSAPLG00000013246

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013803

46795002 - 46853850

58849