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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_46893151_46894192_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

46893151 - 46894192

Intron Length:

1042

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAA|GTATGTACA

5'SS Class:

major

3'SS Sequence:

TATGTTTATCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTTAT

U12 Branch Point Sequence:

TTATGTTTATCT

Flanking Amino Acid:

YPFFQNPSLDKHPVYPEDLP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.8

0.68

76.1

32.7

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

73.9

0.54

66.9

43.9

Minor 5ss

43.8

-0.7

2.4

52.2

38.6

Minor BPS

58.7

0.35

80.4

41.8

Associated Gene:

Gene:

SECISBP2

Ensembl Gene ID:

ENSAPLG00000013053

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019249

46891401 - 46914075

22675

ENSAPLT00000013604

46893062 - 46914075

21014