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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_46894455_46894940_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

46894455 - 46894940

Intron Length:

486

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCACT

5'SS Class:

strong_major

3'SS Sequence:

AAATACTTTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACTAAA

U12 Branch Point Sequence:

AGTTCTAGAATC

Flanking Amino Acid:

IRQESKNLSKQRRSKEDEKK

Intron Amino Acid Position:

118

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.8

80.5

33.9

Major BPS

68.7

0.47

0.9

67.9

Major PPT

70.8

0.47

62.9

42.8

Minor 5ss

36.6

-1.5

2.9

49.5

46.5

Minor BPS

50.6

-0

1.7

63.6

35.5

Associated Gene:

Gene:

SECISBP2

Ensembl Gene ID:

ENSAPLG00000013053

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019249

46891401 - 46914075

22675

ENSAPLT00000013604

46893062 - 46914075

21014