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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_46895730_46896466_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

46895730 - 46896466

Intron Length:

737

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTAGCTAA

5'SS Class:

major

3'SS Sequence:

CTCTATTTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTCAT

U12 Branch Point Sequence:

TTATTCATATTT

Flanking Amino Acid:

PEMSPWLNGKEDVSVENKAP

Intron Amino Acid Position:

236

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.66

1.2

72.3

35.4

Major BPS

92.2

1.05

0.7

91.9

19.6

Major PPT

84.9

0.79

0.8

79.1

32.6

Minor 5ss

39.5

-1.2

2.8

47.4

Minor BPS

55.2

0.24

1.8

77.34

39.3

Associated Gene:

Gene:

SECISBP2

Ensembl Gene ID:

ENSAPLG00000013053

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019249

46891401 - 46914075

22675

ENSAPLT00000013604

46893062 - 46914075

21014