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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_46896555_46898340_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

46896555 - 46898340

Intron Length:

1786

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTCCTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTGAT

U12 Branch Point Sequence:

ATGTCTTTGAAT

Flanking Amino Acid:

SLIPSSFDGREAFPKAPTAD

Intron Amino Acid Position:

265

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

96.5

1.1

0.7

87.9

25.6

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

92.5

0.96

0.6

92.6

17.3

Minor 5ss

35.3

-1.7

3.2

50.4

Minor BPS

66.3

0.6

1.4

78.15

38.3

Associated Gene:

Gene:

SECISBP2

Ensembl Gene ID:

ENSAPLG00000013053

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019249

46891401 - 46914075

22675

ENSAPLT00000013604

46893062 - 46914075

21014