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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_46899202_46902115_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

46899202 - 46902115

Intron Length:

2914

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACAGTGA

5'SS Class:

major

3'SS Sequence:

TTAATTTATTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTTAT

U12 Branch Point Sequence:

TTCTGTTTAATT

Flanking Amino Acid:

TATQEPPRIEDAEEFPDLVT

Intron Amino Acid Position:

368

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.1

0.47

1.1

60.1

41.3

Major BPS

79.9

0.74

0.9

69.7

37.1

Major PPT

75.3

0.57

0.9

74.6

Minor 5ss

34.4

-1.8

3.5

47.2

48.2

Minor BPS

67.9

0.64

1.7

82.98

39.3

Associated Gene:

Gene:

SECISBP2

Ensembl Gene ID:

ENSAPLG00000013053

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019249

46891401 - 46914075

22675

ENSAPLT00000013604

46893062 - 46914075

21014