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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_46907305_46908919_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

46907305 - 46908919

Intron Length:

1615

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGCTGCTA

5'SS Class:

major

3'SS Sequence:

TTCTATGTTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTTTTATTT

Flanking Amino Acid:

KAKRPTPLKKIILKEREQRK

Intron Amino Acid Position:

575

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.7

0.37

1.1

58.7

41.7

Major BPS

96.5

1.15

0.6

34.2

Major PPT

78.7

0.65

0.9

77.1

36.9

Minor 5ss

27.9

-2.5

3.5

38.6

46.4

Minor BPS

70.5

0.72

1.5

86.8

33.5

Associated Gene:

Gene:

SECISBP2

Ensembl Gene ID:

ENSAPLG00000013053

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019249

46891401 - 46914075

22675

ENSAPLT00000013604

46893062 - 46914075

21014