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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_46912088_46912975_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

46912088 - 46912975

Intron Length:

888

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTTGG

5'SS Class:

strong_major

3'SS Sequence:

TGTATTTAAATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTTAA

U12 Branch Point Sequence:

TTGTATTTAAAT

Flanking Amino Acid:

VGIFSYDGAQDHFHRMVQLT

Intron Amino Acid Position:

793

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.7

0.94

0.8

74.8

38.1

Major BPS

79.5

0.73

0.9

36.9

Major PPT

66.3

0.37

63.1

42.1

Minor 5ss

34.2

-1.8

2.8

40.6

45.6

Minor BPS

66.6

0.6

1.6

82.17

Associated Gene:

Gene:

SECISBP2

Ensembl Gene ID:

ENSAPLG00000013053

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019249

46891401 - 46914075

22675

ENSAPLT00000013604

46893062 - 46914075

21014