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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_46917399_46917941_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

46917399 - 46917941

Intron Length:

543

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGAATT

5'SS Class:

strong_major

3'SS Sequence:

TTTTATCCTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TCCTTTTTATCC

Flanking Amino Acid:

KMMQNWRKTWESCNKKNSCL

Intron Amino Acid Position:

832

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.83

0.9

84.6

33.3

Major BPS

96.5

1.15

0.6

34.2

Major PPT

88.2

0.86

0.7

85.9

28.3

Minor 5ss

-1.2

3.1

50.4

45.6

Minor BPS

58.3

0.24

1.6

64.74

41.8

Associated Gene:

Gene:

SEMA4D

Ensembl Gene ID:

ENSAPLG00000012901

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013458

46917337 - 46960006

42670

ENSAPLT00000044446

46917337 - 46960006

42670