Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_46919630_46930176_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

46919630 - 46930176

Intron Length:

10547

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTTGG

5'SS Class:

strong_major

3'SS Sequence:

GACATTTTTATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTATCAT

U12 Branch Point Sequence:

TTTTCCCCAAAG

Flanking Amino Acid:

GHFHLFCQATGPSDSHFVWK

Intron Amino Acid Position:

729

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.04

0.8

78.8

38.3

Major BPS

70.5

0.51

1.3

41.2

Major PPT

71.3

0.48

0.9

64.8

Minor 5ss

39.6

-1.2

2.8

49.7

46.6

Minor BPS

54.6

0.01

2.1

70.33

42.1

Associated Gene:

Gene:

SEMA4D

Ensembl Gene ID:

ENSAPLG00000012901

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044446

46917337 - 46960006

42670

ENSAPLT00000013458

46917337 - 46960006

42670