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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_469253_469499_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

469253 - 469499

Intron Length:

247

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAGATA

5'SS Class:

strong_major

3'SS Sequence:

TGTCTCTCTGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATAAT

U12 Branch Point Sequence:

TGTTTTTTAGTC

Flanking Amino Acid:

LDAIAPKREKTHGEVERRIV

Intron Amino Acid Position:

365

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.3

0.78

0.9

81.1

32.6

Major BPS

0.75

78.6

Major PPT

78.9

0.65

0.8

31.1

Minor 5ss

35.2

-1.7

3.3

48.1

47.6

Minor BPS

61.9

0.35

1.5

70.24

35.6

Associated Gene:

Gene:

VCP

Ensembl Gene ID:

ENSAPLG00000004533

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004747

455960 - 477162

21203