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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_46930384_46932852_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

46930384 - 46932852

Intron Length:

2469

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATAGTG

5'SS Class:

strong_major

3'SS Sequence:

TTCTGTCGCACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTAGTAC

U12 Branch Point Sequence:

TTTTTCTTTTCT

Flanking Amino Acid:

GPTVAAAPTEASSPIPFPPT

Intron Amino Acid Position:

660

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

71.8

38.2

Major BPS

49.9

-0

1.4

51.8

43.6

Major PPT

73.2

0.52

0.9

68.1

37.6

Minor 5ss

34.1

-1.8

3.5

47.2

48.2

Minor BPS

47.9

-0

3.6

87.49

38.1

Associated Gene:

Gene:

SEMA4D

Ensembl Gene ID:

ENSAPLG00000012901

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013458

46917337 - 46960006

42670