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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_46933180_46934275_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

46933180 - 46934275

Intron Length:

1096

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGTTAC

5'SS Class:

strong_major

3'SS Sequence:

TTTGATGTTCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

TTTATTTTGATG

Flanking Amino Acid:

NIGGDASSCSDKVRENSLQH

Intron Amino Acid Position:

551

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.4

0.81

0.9

76.2

28.3

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

78.6

0.64

69.4

45.7

Minor 5ss

35.2

-1.7

2.8

40.3

40.2

Minor BPS

0.2

1.3

66.02

36.3

Associated Gene:

Gene:

SEMA4D

Ensembl Gene ID:

ENSAPLG00000012901

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023003

46932266 - 46960006

27741

ENSAPLT00000013458

46917337 - 46960006

42670