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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_46934718_46938836_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

46934718 - 46938836

Intron Length:

4119

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAGGTGCT

5'SS Class:

major

3'SS Sequence:

TGTCTGTTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAGTGAT

U12 Branch Point Sequence:

GTTTGAGAAAGT

Flanking Amino Acid:

VQTLLLSSKKGRRYLYAGSN

Intron Amino Acid Position:

479

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.4

0.62

72.8

35.1

Major BPS

64.7

0.36

1.2

55.1

42.1

Major PPT

79.3

0.66

0.9

77.1

37.1

Minor 5ss

35.6

-1.6

3.5

49.9

40.8

Minor BPS

36.2

-0.9

2.7

61.23

48.2

Associated Gene:

Gene:

SEMA4D

Ensembl Gene ID:

ENSAPLG00000012901

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044446

46917337 - 46960006

42670

ENSAPLT00000023003

46932266 - 46960006

27741

ENSAPLT00000013458

46917337 - 46960006

42670