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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_46940805_46942318_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

46940805 - 46942318

Intron Length:

1514

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGACAG

5'SS Class:

major

3'SS Sequence:

TTAATGCCAAAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTCTTTTTAATG

Flanking Amino Acid:

MIPRIARVCKRDQGGLRTLQ

Intron Amino Acid Position:

255

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.5

0.58

58.6

42.2

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

53.9

0.09

1.2

53.9

40.4

Minor 5ss

24.5

-2.9

3.1

28.8

43.7

Minor BPS

71.1

0.52

1.3

69.97

38.4

Associated Gene:

Gene:

SEMA4D

Ensembl Gene ID:

ENSAPLG00000012901

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044446

46917337 - 46960006

42670

ENSAPLT00000023003

46932266 - 46960006

27741

ENSAPLT00000013458

46917337 - 46960006

42670