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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_46943914_46944839_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

46943914 - 46944839

Intron Length:

926

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTAAGTTTC

5'SS Class:

strong_major

3'SS Sequence:

TTTTGTGTTAAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTAAAA

U12 Branch Point Sequence:

TTTGTGTTAAAG

Flanking Amino Acid:

PAQSYTSVMVDEELYSGTSY

Intron Amino Acid Position:

166

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.9

82.6

31.3

Major BPS

73.1

0.58

79.6

29.1

Major PPT

74.1

0.54

1.1

74.5

39.3

Minor 5ss

45.2

-0.5

2.8

62.5

42.2

Minor BPS

49.2

-0.2

2.3

63.72

44.3

Associated Gene:

Gene:

SEMA4D

Ensembl Gene ID:

ENSAPLG00000012901

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044446

46917337 - 46960006

42670

ENSAPLT00000023003

46932266 - 46960006

27741

ENSAPLT00000013458

46917337 - 46960006

42670