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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_46944934_46946187_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

46944934 - 46946187

Intron Length:

1254

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGAGCC

5'SS Class:

strong_major

3'SS Sequence:

TCATTTTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

TGGTTTTCAACT

Flanking Amino Acid:

NAFQPTCDYLNLISFELGGK

Intron Amino Acid Position:

135

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

0.9

68.7

34.5

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

88.3

0.86

0.7

84.1

30.5

Minor 5ss

31.8

-2.1

3.3

40.1

39.9

Minor BPS

62.8

0.48

1.5

76.32

40.6

Associated Gene:

Gene:

SEMA4D

Ensembl Gene ID:

ENSAPLG00000012901

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044446

46917337 - 46960006

42670

ENSAPLT00000023003

46932266 - 46960006

27741

ENSAPLT00000013458

46917337 - 46960006

42670