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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_46946287_46947690_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

46946287 - 46947690

Intron Length:

1404

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTTCT

5'SS Class:

strong_major

3'SS Sequence:

TCCTCTATTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCAGAC

U12 Branch Point Sequence:

TTGTCCTCTATT

Flanking Amino Acid:

KCAVKGKSEQTECRNYVRVL

Intron Amino Acid Position:

102

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.2

0.92

0.8

83.2

29.4

Major BPS

64.2

0.35

60.7

37.6

Major PPT

82.1

0.72

0.8

76.2

30.9

Minor 5ss

48.9

-0.1

2.4

68.1

42.9

Minor BPS

60.5

0.41

1.9

80.22

41.9

Associated Gene:

Gene:

SEMA4D

Ensembl Gene ID:

ENSAPLG00000012901

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044446

46917337 - 46960006

42670

ENSAPLT00000023003

46932266 - 46960006

27741

ENSAPLT00000013458

46917337 - 46960006

42670