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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_46947754_46949017_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

46947754 - 46949017

Intron Length:

1264

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTATG

5'SS Class:

strong_major

3'SS Sequence:

GTTTTTCACTTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

TTCTTATTACCT

Flanking Amino Acid:

AINIAEKQHELQWKVTEDKR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.2

1.02

0.7

86.9

30.1

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

0.56

0.9

74.6

35.4

Minor 5ss

33.9

-1.8

2.8

41.5

45.1

Minor BPS

59.3

0.37

1.9

80.31

41.8

Associated Gene:

Gene:

SEMA4D

Ensembl Gene ID:

ENSAPLG00000012901

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044446

46917337 - 46960006

42670

ENSAPLT00000023003

46932266 - 46960006

27741

ENSAPLT00000013458

46917337 - 46960006

42670