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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_46949164_46951496_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

46949164 - 46951496

Intron Length:

2333

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGAAGA

5'SS Class:

strong_major

3'SS Sequence:

TTCATTTCAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTCAT

U12 Branch Point Sequence:

TTTCCTTTCATT

Flanking Amino Acid:

PVPRITWEHREVQLIHFHES

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.4

0.98

0.8

80.8

33.7

Major BPS

87.4

0.93

0.9

87.9

29.5

Major PPT

77.2

0.61

0.9

73.4

35.7

Minor 5ss

32.8

-2

2.9

40.7

45.1

Minor BPS

66.2

0.59

1.7

84.98

35.9

Associated Gene:

Gene:

SEMA4D

Ensembl Gene ID:

ENSAPLG00000012901

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044446

46917337 - 46960006

42670

ENSAPLT00000023003

46932266 - 46960006

27741

ENSAPLT00000013458

46917337 - 46960006

42670