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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_46951889_46959942_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

46951889 - 46959942

Intron Length:

8054

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGGGAA

5'SS Class:

strong_major

3'SS Sequence:

CCTCTCTCCACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTTAC

U12 Branch Point Sequence:

TTCTCTTCTACT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

69.4

37.1

Major BPS

73.7

0.59

0.9

63.6

35.1

Major PPT

77.5

0.62

0.7

71.6

26.5

Minor 5ss

27.5

-2.6

3.6

37.2

47.4

Minor BPS

59.3

0.37

1.9

80.15

41.9

Associated Gene:

Gene:

SEMA4D

Ensembl Gene ID:

ENSAPLG00000012901

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023003

46932266 - 46960006

27741

ENSAPLT00000013458

46917337 - 46960006

42670

ENSAPLT00000044446

46917337 - 46960006

42670