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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_469636_471184_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

469636 - 471184

Intron Length:

1549

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAACCAGG

5'SS Class:

major

3'SS Sequence:

TTGTACTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCAACAT

U12 Branch Point Sequence:

TGTTTTGTACTC

Flanking Amino Acid:

NSIDPALRRFGRFDREVDIG

Intron Amino Acid Position:

410

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.6

0.39

1.2

56.3

48.1

Major BPS

58.4

0.21

1.2

65.6

39.7

Major PPT

74.8

0.56

0.9

66.2

40.4

Minor 5ss

44.5

-0.6

2.7

54.6

44.5

Minor BPS

46.4

-0.2

2.2

61.57

38.9

Associated Gene:

Gene:

VCP

Ensembl Gene ID:

ENSAPLG00000004533

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004747

455960 - 477162

21203